famNet database - visualizing functional association between gene families and detecting duplicated/conserved biological processes between species.
famNet detects conserved association between Pfam and PLAZA labels in the co-expression networks. The analysis can reveal conservation (modules found across multiple species) and duplication of modules (modules found multiple times within one species).
To start using famNet, enter the gene identifier (e.g. at4g32410), Pfam (e.g. Cellulose_synt) or PLAZA identifier (e.g. ORTHO000003) or a keyword (e.g. cellulose) into a box below.
The table containing conserved and duplicated modules found in Arabidopsis, barley, Medicago, rice, poplar, soybean and wheat are available here.
To start using famNet, enter the gene identifier (e.g. at4g32410), Pfam (e.g. Cellulose_synt) or PLAZA identifier (e.g. ORTHO000003) or a keyword (e.g. cellulose) into a box below.
The table containing conserved and duplicated modules found in Arabidopsis, barley, Medicago, rice, poplar, soybean and wheat are available here.